Package com.ibm.fhir.model.resource

Class SubstanceNucleicAcid.Subunit.Linkage.Builder

    • Method Detail

      • id

        public SubstanceNucleicAcid.Subunit.Linkage.Builder id​(java.lang.String id)
        Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
        Overrides:
        id in class BackboneElement.Builder
        Parameters:
        id - Unique id for inter-element referencing
        Returns:
        A reference to this Builder instance

      • extension

        public SubstanceNucleicAcid.Subunit.Linkage.Builder extension​(Extension... extension)
        May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

        Adds new element(s) to the existing list. If any of the elements are null, calling build() will fail.

        Overrides:
        extension in class BackboneElement.Builder
        Parameters:
        extension - Additional content defined by implementations
        Returns:
        A reference to this Builder instance

      • extension

        public SubstanceNucleicAcid.Subunit.Linkage.Builder extension​(java.util.Collection<Extension> extension)
        May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

        Replaces the existing list with a new one containing elements from the Collection. If any of the elements are null, calling build() will fail.

        Overrides:
        extension in class BackboneElement.Builder
        Parameters:
        extension - Additional content defined by implementations
        Returns:
        A reference to this Builder instance
        Throws:
        java.lang.NullPointerException - If the passed collection is null

      • modifierExtension

        public SubstanceNucleicAcid.Subunit.Linkage.Builder modifierExtension​(Extension... modifierExtension)
        May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.

        Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).

        Adds new element(s) to the existing list. If any of the elements are null, calling build() will fail.

        Overrides:
        modifierExtension in class BackboneElement.Builder
        Parameters:
        modifierExtension - Extensions that cannot be ignored even if unrecognized
        Returns:
        A reference to this Builder instance

      • modifierExtension

        public SubstanceNucleicAcid.Subunit.Linkage.Builder modifierExtension​(java.util.Collection<Extension> modifierExtension)
        May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.

        Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).

        Replaces the existing list with a new one containing elements from the Collection. If any of the elements are null, calling build() will fail.

        Overrides:
        modifierExtension in class BackboneElement.Builder
        Parameters:
        modifierExtension - Extensions that cannot be ignored even if unrecognized
        Returns:
        A reference to this Builder instance
        Throws:
        java.lang.NullPointerException - If the passed collection is null

      • connectivity

        public SubstanceNucleicAcid.Subunit.Linkage.Builder connectivity​(java.lang.String connectivity)
        Convenience method for setting connectivity.
        Parameters:
        connectivity - The entity that links the sugar residues together should also be captured for nearly all naturally occurring nucleic acid the linkage is a phosphate group. For many synthetic oligonucleotides phosphorothioate linkages are often seen. Linkage connectivity is assumed to be 3’-5’. If the linkage is either 3’-3’ or 5’-5’ this should be specified
        Returns:
        A reference to this Builder instance
        See Also:
        connectivity(com.ibm.fhir.model.type.String)

      • connectivity

        public SubstanceNucleicAcid.Subunit.Linkage.Builder connectivity​(String connectivity)
        The entity that links the sugar residues together should also be captured for nearly all naturally occurring nucleic acid the linkage is a phosphate group. For many synthetic oligonucleotides phosphorothioate linkages are often seen. Linkage connectivity is assumed to be 3’-5’. If the linkage is either 3’-3’ or 5’-5’ this should be specified.
        Parameters:
        connectivity - The entity that links the sugar residues together should also be captured for nearly all naturally occurring nucleic acid the linkage is a phosphate group. For many synthetic oligonucleotides phosphorothioate linkages are often seen. Linkage connectivity is assumed to be 3’-5’. If the linkage is either 3’-3’ or 5’-5’ this should be specified
        Returns:
        A reference to this Builder instance

      • identifier

        public SubstanceNucleicAcid.Subunit.Linkage.Builder identifier​(Identifier identifier)
        Each linkage will be registered as a fragment and have an ID.
        Parameters:
        identifier - Each linkage will be registered as a fragment and have an ID
        Returns:
        A reference to this Builder instance

      • name

        public SubstanceNucleicAcid.Subunit.Linkage.Builder name​(String name)
        Each linkage will be registered as a fragment and have at least one name. A single name shall be assigned to each linkage.
        Parameters:
        name - Each linkage will be registered as a fragment and have at least one name. A single name shall be assigned to each linkage
        Returns:
        A reference to this Builder instance

      • residueSite

        public SubstanceNucleicAcid.Subunit.Linkage.Builder residueSite​(String residueSite)
        Residues shall be captured as described in 5.3.6.8.3.
        Parameters:
        residueSite - Residues shall be captured as described in 5.3.6.8.3
        Returns:
        A reference to this Builder instance