Uses of Class
com.ibm.fhir.model.resource.MolecularSequence.Variant.Builder

Packages that use MolecularSequence.Variant.Builder

Package	Description
com.ibm.fhir.model.resource

Uses of MolecularSequence.Variant.Builder in com.ibm.fhir.model.resource

Methods in com.ibm.fhir.model.resource that return MolecularSequence.Variant.Builder

Modifier and Type	Method	Description
static MolecularSequence.Variant.Builder	MolecularSequence.Variant.builder()
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.cigar(String cigar)	Extended CIGAR string for aligning the sequence with reference bases.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.cigar(java.lang.String cigar)	Convenience method for setting cigar.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.end(Integer end)	End position of the variant on the reference sequence.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.end(java.lang.Integer end)	Convenience method for setting end.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.extension(Extension... extension)	May be used to represent additional information that is not part of the basic definition of the element.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.extension(java.util.Collection<Extension> extension)	May be used to represent additional information that is not part of the basic definition of the element.
protected MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.from(MolecularSequence.Variant variant)
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.id(java.lang.String id)	Unique id for the element within a resource (for internal references).
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.modifierExtension(Extension... modifierExtension)	May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.modifierExtension(java.util.Collection<Extension> modifierExtension)	May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.observedAllele(String observedAllele)	An allele is one of a set of coexisting sequence variants of a gene ([SO:0001023](http://www.sequenceontology.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.observedAllele(java.lang.String observedAllele)	Convenience method for setting observedAllele.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.referenceAllele(String referenceAllele)	An allele is one of a set of coexisting sequence variants of a gene ([SO:0001023](http://www.sequenceontology.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.referenceAllele(java.lang.String referenceAllele)	Convenience method for setting referenceAllele.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.start(Integer start)	Start position of the variant on the reference sequence.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.start(java.lang.Integer start)	Convenience method for setting start.
MolecularSequence.Variant.Builder	MolecularSequence.Variant.toBuilder()
MolecularSequence.Variant.Builder	MolecularSequence.Variant.Builder.variantPointer(Reference variantPointer)	A pointer to an Observation containing variant information.