Package org.linuxforhealth.fhir.ecqm.r4

Class R4MeasureEvaluation<ST extends DomainResource>

java.lang.Object

org.linuxforhealth.fhir.ecqm.common.MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST>

org.linuxforhealth.fhir.ecqm.r4.R4MeasureEvaluation<ST>

Type Parameters:

ST - Model class for the subject type that will be evaluated (e.g. Patient)

public class R4MeasureEvaluation<ST extends DomainResource>
extends MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST>

Implementation of FHIR Quality Measure Evaluation logic on top of the IBM FHIR Server model.

Field Summary

Fields inherited from class org.linuxforhealth.fhir.ecqm.common.MeasureEvaluation

context, EXT_DAVINCI_POPULATION_REFERENCE, getId, measure, measurementPeriod, packageName, subjectOrPractitionerId, URL_CODESYSTEM_MEASURE_POPULATION

Constructor Summary

Constructors

Constructor	Description
R4MeasureEvaluation(org.opencds.cqf.cql.engine.execution.Context context, Measure measure, org.opencds.cqf.cql.engine.runtime.Interval measurementPeriod, java.lang.String packageName, java.util.function.Function<DomainResource,java.lang.String> getId)
R4MeasureEvaluation(org.opencds.cqf.cql.engine.execution.Context context, Measure measure, org.opencds.cqf.cql.engine.runtime.Interval measurementPeriod, java.lang.String packageName, java.util.function.Function<DomainResource,java.lang.String> getId, java.lang.String patientOrPractitionerId)

Method Summary

Modifier and Type	Method	Description
protected void	addContained(MeasureReport.Builder report, DomainResource resource)
protected void	addEvaluatedResource(MeasureReport.Builder report, DomainResource resource)
protected void	addExtension(Reference.Builder reference, Extension extension)
protected void	addPopulationReport(MeasureReport.Builder report, MeasureReport.Group.Builder group, Measure.Group.Population populationCriteria, int populationCount, java.lang.Iterable<ST> subjectPopulation)
protected void	addReportGroup(MeasureReport.Builder report, MeasureReport.Group.Builder group)
protected Coding	createCoding(java.lang.String text)
protected Extension	createCodingExtension(java.lang.String url, java.lang.String codeSystem, java.lang.String code)
protected List.Entry	createListEntry(Reference.Builder reference)
protected List	createListResource(java.util.Collection<List.Entry> entries)
protected Extension	createMeasureInfoExtension(MeasureInfo measureInfo)
protected MeasureReport.Builder	createMeasureReport(java.lang.String status, MeasureReportType type, org.opencds.cqf.cql.engine.runtime.Interval measurementPeriod, java.util.List<ST> subjects)
protected DomainResource	createPatientObservation(Measure measure, java.lang.String populationId, Coding coding)
protected DomainResource	createPopulationObservation(Measure measure, java.lang.String populationId, Coding coding, java.lang.Integer value)
protected Reference.Builder	createReference(java.lang.String resourceId)
protected MeasureReport.Group.Builder	createReportGroup(java.lang.String id)
protected java.lang.String	getCodingCode(Coding coding)
protected java.lang.String	getCriteriaExpression(Measure.Group.Population population)
protected Coding	getExtensionCoding(ST patient, java.lang.String coreCategory, java.lang.String sdeCode)	Retrieve the coding from an extension that that looks like the following...
protected java.lang.Iterable<Measure.Group>	getGroup()
protected java.lang.String	getGroupId(Measure.Group group)
protected MeasureScoring	getMeasureScoring()
protected java.lang.Iterable<Measure.Group.Population>	getPopulation(Measure.Group mgc)
protected MeasurePopulationType	getPopulationType(Measure.Group.Population population)
protected Coding	getSDECoding(Measure.SupplementalData sdeItem)
protected java.lang.String	getSDEExpression(Measure.SupplementalData sdeItem)
protected java.util.List<Measure.SupplementalData>	getSupplementalData(Measure measure)
protected boolean	isCoding(java.lang.Object obj)
protected void	setEvaluatedResources(MeasureReport.Builder report, java.util.Collection<Reference.Builder> evaluatedResources)
protected void	setGroupScore(MeasureReport.Group.Builder group, java.lang.Double score)

Methods inherited from class org.linuxforhealth.fhir.ecqm.common.MeasureEvaluation

evaluate, evaluatePatientListMeasure, evaluatePatientMeasure, evaluatePopulationMeasure, evaluateSubjectListMeasure

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

R4MeasureEvaluation

public R4MeasureEvaluation(org.opencds.cqf.cql.engine.execution.Context context,
                           Measure measure,
                           org.opencds.cqf.cql.engine.runtime.Interval measurementPeriod,
                           java.lang.String packageName,
                           java.util.function.Function<DomainResource,java.lang.String> getId,
                           java.lang.String patientOrPractitionerId)

R4MeasureEvaluation

public R4MeasureEvaluation(org.opencds.cqf.cql.engine.execution.Context context,
                           Measure measure,
                           org.opencds.cqf.cql.engine.runtime.Interval measurementPeriod,
                           java.lang.String packageName,
                           java.util.function.Function<DomainResource,java.lang.String> getId)

Method Detail

addPopulationReport

protected void addPopulationReport(MeasureReport.Builder report,
                                   MeasureReport.Group.Builder group,
                                   Measure.Group.Population populationCriteria,
                                   int populationCount,
                                   java.lang.Iterable<ST> subjectPopulation)

Specified by:

addPopulationReport in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

addReportGroup

protected void addReportGroup(MeasureReport.Builder report,
                              MeasureReport.Group.Builder group)

Specified by:

addReportGroup in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createMeasureReport

protected MeasureReport.Builder createMeasureReport(java.lang.String status,
                                                    MeasureReportType type,
                                                    org.opencds.cqf.cql.engine.runtime.Interval measurementPeriod,
                                                    java.util.List<ST> subjects)

Specified by:

createMeasureReport in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createReportGroup

protected MeasureReport.Group.Builder createReportGroup(java.lang.String id)

Specified by:

createReportGroup in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getCriteriaExpression

protected java.lang.String getCriteriaExpression(Measure.Group.Population population)

Specified by:

getCriteriaExpression in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getGroup

protected java.lang.Iterable<Measure.Group> getGroup()

Specified by:

getGroup in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getGroupId

protected java.lang.String getGroupId(Measure.Group group)

Specified by:

getGroupId in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getMeasureScoring

protected MeasureScoring getMeasureScoring()

Specified by:

getMeasureScoring in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getPopulation

protected java.lang.Iterable<Measure.Group.Population> getPopulation(Measure.Group mgc)

Specified by:

getPopulation in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getPopulationType

protected MeasurePopulationType getPopulationType(Measure.Group.Population population)

Specified by:

getPopulationType in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

setGroupScore

protected void setGroupScore(MeasureReport.Group.Builder group,
                             java.lang.Double score)

Specified by:

setGroupScore in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getSDEExpression

protected java.lang.String getSDEExpression(Measure.SupplementalData sdeItem)

Specified by:

getSDEExpression in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getSupplementalData

protected java.util.List<Measure.SupplementalData> getSupplementalData(Measure measure)

Specified by:

getSupplementalData in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getSDECoding

protected Coding getSDECoding(Measure.SupplementalData sdeItem)

Specified by:

getSDECoding in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

isCoding

protected boolean isCoding(java.lang.Object obj)

Specified by:

isCoding in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createCoding

protected Coding createCoding(java.lang.String text)

Specified by:

createCoding in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getCodingCode

protected java.lang.String getCodingCode(Coding coding)

Specified by:

getCodingCode in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createPatientObservation

protected DomainResource createPatientObservation(Measure measure,
                                                  java.lang.String populationId,
                                                  Coding coding)

Specified by:

createPatientObservation in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createPopulationObservation

protected DomainResource createPopulationObservation(Measure measure,
                                                     java.lang.String populationId,
                                                     Coding coding,
                                                     java.lang.Integer value)

Specified by:

createPopulationObservation in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createMeasureInfoExtension

protected Extension createMeasureInfoExtension(MeasureInfo measureInfo)

addEvaluatedResource

protected void addEvaluatedResource(MeasureReport.Builder report,
                                    DomainResource resource)

Specified by:

addEvaluatedResource in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

addContained

protected void addContained(MeasureReport.Builder report,
                            DomainResource resource)

Specified by:

addContained in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

getExtensionCoding

protected Coding getExtensionCoding(ST patient,
                                    java.lang.String coreCategory,
                                    java.lang.String sdeCode)

Description copied from class: MeasureEvaluation

Retrieve the coding from an extension that that looks like the following... { "url": "http://hl7.org/fhir/us/core/StructureDefinition/us-core-race", "extension": [ { "url": "ombCategory", "valueCoding": { "system": "urn:oid:2.16.840.1.113883.6.238", "code": "2054-5", "display": "Black or African American" } } ] }

Specified by:

getExtensionCoding in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createCodingExtension

protected Extension createCodingExtension(java.lang.String url,
                                          java.lang.String codeSystem,
                                          java.lang.String code)

Specified by:

createCodingExtension in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createReference

protected Reference.Builder createReference(java.lang.String resourceId)

Specified by:

createReference in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createListResource

protected List createListResource(java.util.Collection<List.Entry> entries)

Specified by:

createListResource in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

createListEntry

protected List.Entry createListEntry(Reference.Builder reference)

Specified by:

createListEntry in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

addExtension

protected void addExtension(Reference.Builder reference,
                            Extension extension)

Specified by:

addExtension in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>

setEvaluatedResources

protected void setEvaluatedResources(MeasureReport.Builder report,
                                     java.util.Collection<Reference.Builder> evaluatedResources)

Specified by:

setEvaluatedResources in class MeasureEvaluation<java.lang.Object,Measure,Measure.Group,Measure.Group.Population,Measure.SupplementalData,MeasureReport.Builder,MeasureReport.Group.Builder,MeasureReport.Group.Population.Builder,Coding,Extension,Reference.Builder,List,List.Entry,DomainResource,ST extends DomainResource>