Uses of Class com.ibm.fhir.persistence.exception.FHIRPersistenceException (IBM FHIR Server)

Packages that use FHIRPersistenceException
Package	Description
com.ibm.fhir.persistence
com.ibm.fhir.persistence.exception
com.ibm.fhir.persistence.helper
com.ibm.fhir.persistence.interceptor
com.ibm.fhir.persistence.jdbc
com.ibm.fhir.persistence.jdbc.connection
com.ibm.fhir.persistence.jdbc.dao.api
com.ibm.fhir.persistence.jdbc.dao.impl
com.ibm.fhir.persistence.jdbc.derby
com.ibm.fhir.persistence.jdbc.dto
com.ibm.fhir.persistence.jdbc.exception
com.ibm.fhir.persistence.jdbc.impl
com.ibm.fhir.persistence.jdbc.postgresql
com.ibm.fhir.persistence.jdbc.util
com.ibm.fhir.persistence.jdbc.util.type
com.ibm.fhir.persistence.util
com.ibm.fhir.server.resources

Uses of FHIRPersistenceException in com.ibm.fhir.persistence

Methods in com.ibm.fhir.persistence that throw FHIRPersistenceException
Modifier and Type	Method	Description
`void`	FHIRPersistenceTransaction.`begin()`	Begin a new transaction on the current thread if a transaction is not started yet.
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistence.`create(FHIRPersistenceContext context, T resource)`	Stores a new FHIR Resource in the datastore.
`default <T extends Resource> SingleResourceResult<T>`	FHIRPersistence.`delete(FHIRPersistenceContext context, Class<T> resourceType, String logicalId)`	Deletes the specified FHIR Resource from the datastore.
`void`	FHIRPersistenceTransaction.`end()`	End the current thread's transaction.
`OperationOutcome`	FHIRPersistence.`getHealth()`	Returns an OperationOutcome indicating the current status of the persistence store / backend
`FHIRPersistence`	FHIRPersistenceFactory.`getInstance()`	Returns an instance of a concrete implementation of the FHIRPersistence interface.
`FHIRPersistence`	PropertyBasedFHIRPersistenceFactory.`getInstance(Properties properties)`
`<T extends Resource> MultiResourceResult<T>`	FHIRPersistence.`history(FHIRPersistenceContext context, Class<T> resourceType, String logicalId)`	Retrieves all of the versions of the specified FHIR Resource.
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistence.`read(FHIRPersistenceContext context, Class<T> resourceType, String logicalId)`	Retrieves the most recent version of a FHIR Resource from the datastore.
`MultiResourceResult<Resource>`	FHIRPersistence.`search(FHIRPersistenceContext context, Class<? extends Resource> resourceType)`	Performs a search on the specified target resource type using the specified search parameters.
`void`	FHIRPersistenceTransaction.`setRollbackOnly()`	Modify the transaction associated with the current thread such that the only possible outcome of the transaction is to roll back the transaction.
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistence.`update(FHIRPersistenceContext context, String logicalId, T resource)`	Updates an existing FHIR Resource by storing a new version in the datastore.
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistence.`vread(FHIRPersistenceContext context, Class<T> resourceType, String logicalId, String versionId)`	Retrieves a specific version of a FHIR Resource from the datastore.

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.exception

Subclasses of FHIRPersistenceException in com.ibm.fhir.persistence.exception
Modifier and Type	Class	Description
`class`	`FHIRPersistenceNotSupportedException`	Thrown for methods or features not yet fully implemented.
`class`	`FHIRPersistenceProcessorException`	Thrown when a failure is found processing search parameters.
`class`	`FHIRPersistenceResourceDeletedException`
`class`	`FHIRPersistenceResourceNotFoundException`
`class`	`FHIRPersistenceVersionIdMismatchException`	This exception class represents an occurrence of a mismatch between the version id in the resource json vs.

Methods in com.ibm.fhir.persistence.exception that return FHIRPersistenceException
Modifier and Type	Method	Description
`FHIRPersistenceException`	FHIRPersistenceException.`withIssue(OperationOutcome.Issue... issues)`
`FHIRPersistenceException`	FHIRPersistenceException.`withIssue(Collection<OperationOutcome.Issue> issues)`
`FHIRPersistenceException`	FHIRPersistenceProcessorException.`withIssue(OperationOutcome.Issue... issues)`
`FHIRPersistenceException`	FHIRPersistenceProcessorException.`withIssue(Collection<OperationOutcome.Issue> issues)`

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.helper

Methods in com.ibm.fhir.persistence.helper that throw FHIRPersistenceException
Modifier and Type	Method	Description
`void`	FHIRTransactionHelper.`begin()`	If a transaction has not yet been started on this thread, then start one.
`void`	FHIRTransactionHelper.`commit()`	If we previously started a transaction on this thread using this helper instance, then commit it now.
`void`	FHIRTransactionHelper.`end()`	Same as commit, but is preferred for readability because `FHIRTransactionHelper.commit()` will actually do a rollback if setRollbackOnly is called on the underlying transaction
`FHIRPersistence`	FHIRPersistenceHelper.`getFHIRPersistenceImplementation()`
`FHIRPersistence`	FHIRPersistenceHelper.`getFHIRPersistenceImplementation(String factoryPropertyName)`
`FHIRPersistence`	PersistenceHelper.`getFHIRPersistenceImplementation()`	Returns an appropriate FHIRPersistance implementation according to the current configuration.
`FHIRPersistence`	PersistenceHelper.`getFHIRPersistenceImplementation(String factoryPropertyName)`	Returns an appropriate FHIRPersistance implementation according to the current configuration.
`default boolean`	PersistenceHelper.`isValidFHIRPersistenceImplementation(String identifier)`	Identifies if a FHIRPersistence implementation can be found by using the given identifier.
`protected String`	FHIRPersistenceHelper.`retrieveFactoryClassName(String factoryPropertyName)`	Retrieves the name of the factory class that should be instantiated for use by the server.
`void`	FHIRTransactionHelper.`rollback()`	If we previously started a transaction on this thread using this helper instance, then perform a rollback now; otherwise, set the transaction as 'rollback only' to prevent it from being committed later.
`void`	FHIRTransactionHelper.`setRollbackOnly()`	Mark the current transaction for rollback.

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.interceptor

Subclasses of FHIRPersistenceException in com.ibm.fhir.persistence.interceptor
Modifier and Type Class Description

class FHIRPersistenceInterceptorException

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc

Methods in com.ibm.fhir.persistence.jdbc that throw FHIRPersistenceException
Modifier and Type	Method	Description
`FHIRPersistence`	FHIRPersistenceJDBCFactory.`getInstance()`
`static ResourceDAO`	FHIRResourceDAOFactory.`getResourceDAO(Connection connection, String schemaName, FHIRDbFlavor flavor)`	Construct a new ResourceDAO implementation matching the database type
`static ResourceDAO`	FHIRResourceDAOFactory.`getResourceDAO(Connection connection, String schemaName, FHIRDbFlavor flavor, TransactionSynchronizationRegistry trxSynchRegistry)`	Construct a new ResourceDAO implementation matching the database type

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.connection

Methods in com.ibm.fhir.persistence.jdbc.connection with type parameters of type FHIRPersistenceException
Modifier and Type	Method	Description
`static <XT extends FHIRPersistenceException> XT`	FHIRDbHelper.`severe(Logger logger, XT fx, String errorMessage, Throwable cause)`	Log the exception message here along with the cause stack.
`static <XT extends FHIRPersistenceException> XT`	FHIRDbHelper.`severe(Logger logger, XT fx, Throwable cause)`	Convenience function to log the cause of an exception about to be thrown.

Methods in com.ibm.fhir.persistence.jdbc.connection that throw FHIRPersistenceException
Modifier and Type	Method	Description
`void`	FHIRTestTransactionAdapter.`begin()`
`void`	FHIRUserTransactionAdapter.`begin()`	If a transaction has not yet been started on this thread, then start one.
`protected void`	FHIRDbConnectionStrategyBase.`configure(Connection connection, String tenantId, String dsId)`	Check with the transaction sync registry to see if this is the first time we've worked with this connection in the current transaction.
`void`	FHIRTestTransactionAdapter.`end()`
`void`	FHIRUserTransactionAdapter.`end()`	If we previously started a transaction on this thread using this helper instance, then commit it now.
`(package private) <T> T`	FHIRUserTransactionAdapter.`func(Supplier<T> s)`	Call the supplier function within a begin/end
`protected Connection`	FHIRDbConnectionStrategyBase.`getConnection(DataSource datasource, String tenantId, String dsId)`	Get a connection configured for the given tenant and datasourceId
`protected Connection`	FHIRDbProxyDatasourceConnectionStrategy.`getConnection(DataSource datasource, String tenantId, String dsId)`
`void`	FHIRTestTransactionAdapter.`setRollbackOnly()`
`void`	FHIRUserTransactionAdapter.`setRollbackOnly()`

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.dao.api

Methods in com.ibm.fhir.persistence.jdbc.dao.api that throw FHIRPersistenceException
Modifier and Type	Method	Description
`int`	ParameterDAO.`acquireCodeSystemId(String codeSystemName)`	Acquire and return the id associated with the passed code-system name.
`int`	ParameterDAO.`acquireParameterNameId(String parameterName)`	Acquire and return the id associated with the passed parameter name.
`void`	ParameterDAO.`addCodeSystemsCacheCandidate(String codeSystemName, Integer codeSystemId)`	Adds a code system name / code system id pair to a candidate collection for population into the CodeSystemsCache.
`void`	ParameterDAO.`addParameterNamesCacheCandidate(String parameterName, Integer parameterId)`	Adds a parameter name / parameter id pair to a candidate collection for population into the ParameterNamesCache.
`void`	ResourceDAO.`addResourceTypeCacheCandidate(String resourceType, Integer resourceTypeId)`	Adds a resource type / resource id pair to a candidate collection for population into the ResourceTypesCache.
`Resource`	ResourceDAO.`insert(Resource resource, List<ExtractedParameterValue> parameters, ParameterDAO parameterDao)`	Inserts the passed Resource DTO and its associated search parameters to the appropriate FHIR resource tables.
`int`	ICodeSystemCache.`readOrAddCodeSystem(String codeSystem)`	Reads the id associated with the name of the passed Parameter from the code_systems table.
`int`	IParameterNameCache.`readOrAddParameterNameId(String parameterName)`	Reads the id associated with the name of the passed Parameter from the Parameter_Names table.

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.dao.impl

Methods in com.ibm.fhir.persistence.jdbc.dao.impl with type parameters of type FHIRPersistenceException
Modifier and Type	Method	Description
`protected <XT extends FHIRPersistenceException> XT`	FHIRDbDAOImpl.`severe(Logger logger, XT fx, String errorMessage, Throwable cause)`	Log the exception message here along with the cause stack.
`protected <XT extends FHIRPersistenceException> XT`	FHIRDbDAOImpl.`severe(Logger logger, XT fx, Throwable cause)`	Convenience function to log the cause of an exception about to be thrown.

Methods in com.ibm.fhir.persistence.jdbc.dao.impl that throw FHIRPersistenceException
Modifier and Type	Method	Description
`int`	ParameterDAOImpl.`acquireCodeSystemId(String codeSystemName)`	Acquire and return the id associated with the passed code-system name.
`int`	ParameterDAOImpl.`acquireParameterNameId(String parameterName)`	Acquire and return the id associated with the passed parameter name.
`void`	ParameterDAOImpl.`addCodeSystemsCacheCandidate(String codeSystemName, Integer codeSystemId)`	Adds a code system name / code system id pair to a candidate collection for population into the CodeSystemsCache.
`void`	ParameterDAOImpl.`addParameterNamesCacheCandidate(String parameterName, Integer parameterId)`	Adds a parameter name / parameter id pair to a candidate collection for population into the ParameterNamesCache.
`void`	ResourceDAOImpl.`addResourceTypeCacheCandidate(String resourceType, Integer resourceTypeId)`	Adds a resource type/ resource id pair to a candidate collection for population into the ResourceTypesCache.
`protected int`	ParameterVisitorBatchDAO.`getCodeSystemId(String codeSystem)`	Look up the code system
`protected int`	ParameterVisitorBatchDAO.`getParameterNameId(String parameterName)`	Look up the normalized id for the parameter, adding it to the parameter_names table if it doesn't yet exist
`Resource`	ResourceDAOImpl.`insert(Resource resource, List<ExtractedParameterValue> parameters, ParameterDAO parameterDao)`
`int`	CodeSystemCacheAdapter.`readOrAddCodeSystem(String codeSystem)`
`int`	ParameterNameCacheAdapter.`readOrAddParameterNameId(String parameterName)`
`void`	ParameterVisitorBatchDAO.`visit(CompositeParmVal compositeParameter)`
`void`	ParameterVisitorBatchDAO.`visit(DateParmVal param)`
`void`	ParameterVisitorBatchDAO.`visit(LocationParmVal param)`
`void`	ParameterVisitorBatchDAO.`visit(NumberParmVal param)`
`void`	ParameterVisitorBatchDAO.`visit(QuantityParmVal param)`
`void`	ParameterVisitorBatchDAO.`visit(StringParmVal param)`
`void`	ParameterVisitorBatchDAO.`visit(TokenParmVal param)`

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.derby

Methods in com.ibm.fhir.persistence.jdbc.derby that throw FHIRPersistenceException
Modifier and Type	Method	Description
`Resource`	DerbyResourceDAO.`insert(Resource resource, List<ExtractedParameterValue> parameters, ParameterDAO parameterDao)`	Inserts the passed FHIR Resource and associated search parameters to a Derby or PostgreSql FHIR database.

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.dto

Methods in com.ibm.fhir.persistence.jdbc.dto that throw FHIRPersistenceException
Modifier and Type	Method	Description
`void`	CompositeParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	DateParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	ExtractedParameterValue.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	LocationParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	NumberParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	QuantityParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	ReferenceParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	StringParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	TokenParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	UriParmVal.`accept(ExtractedParameterValueVisitor visitor)`	We know our type, so we can call the correct method on the visitor
`void`	ExtractedParameterValueVisitor.`visit(CompositeParmVal compositeParameter)`	Process a composite parameter value
`void`	ExtractedParameterValueVisitor.`visit(DateParmVal dateParameter)`	Process a date parameter value
`void`	ExtractedParameterValueVisitor.`visit(LocationParmVal locationParameter)`	Process a location parameter value
`void`	ExtractedParameterValueVisitor.`visit(NumberParmVal numberParameter)`	Process a number parameter value
`void`	ExtractedParameterValueVisitor.`visit(QuantityParmVal quantityParameter)`	Process a quantity parameter value
`void`	ExtractedParameterValueVisitor.`visit(StringParmVal stringParameter)`	Process a string parameter value
`void`	ExtractedParameterValueVisitor.`visit(TokenParmVal tokenParameter)`	Process a token parameter value

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.exception

Subclasses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.exception
Modifier and Type	Class	Description
`class`	`FHIRPersistenceDataAccessException`	This exception class represents failures encountered while attempting to access (read, write) data in the FHIR DB.
`class`	`FHIRPersistenceDBCleanupException`	This exception class represents failures encountered while attempting to close/cleanup JDBC resources.
`class`	`FHIRPersistenceDBConnectException`	This exception class represents failures encountered while attempting to connect to a JDBC database or datasource.
`class`	`FHIRPersistenceFKVException`	This exception class is thrown when Foreign Key violations are encountered while attempting to access data in the FHIR DB.

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.impl

Methods in com.ibm.fhir.persistence.jdbc.impl that throw FHIRPersistenceException
Modifier and Type	Method	Description
`protected List<Resource>`	FHIRPersistenceJDBCImpl.`buildSortedFhirResources(ResourceDAO resourceDao, FHIRPersistenceContext context, Class<? extends Resource> resourceType, List<Long> sortedIdList, List<String> elements)`	This method takes the passed list of sorted Resource ids, acquires the Resource corresponding to each id, and returns those Resources in a List, sorted according to the input sorted ids.
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistenceJDBCImpl.`create(FHIRPersistenceContext context, T resource)`
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistenceJDBCImpl.`delete(FHIRPersistenceContext context, Class<T> resourceType, String logicalId)`
`OperationOutcome`	FHIRPersistenceJDBCImpl.`getHealth()`
`<T extends Resource> MultiResourceResult<T>`	FHIRPersistenceJDBCImpl.`history(FHIRPersistenceContext context, Class<T> resourceType, String logicalId)`
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistenceJDBCImpl.`read(FHIRPersistenceContext context, Class<T> resourceType, String logicalId)`
`MultiResourceResult<Resource>`	FHIRPersistenceJDBCImpl.`search(FHIRPersistenceContext context, Class<? extends Resource> resourceType)`
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistenceJDBCImpl.`update(FHIRPersistenceContext context, String logicalId, T resource)`
`<T extends Resource> SingleResourceResult<T>`	FHIRPersistenceJDBCImpl.`vread(FHIRPersistenceContext context, Class<T> resourceType, String logicalId, String versionId)`

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.postgresql

Methods in com.ibm.fhir.persistence.jdbc.postgresql that throw FHIRPersistenceException
Modifier and Type	Method	Description
`Resource`	PostgreSqlResourceDAO.`insert(Resource resource, List<ExtractedParameterValue> parameters, ParameterDAO parameterDao)`	Inserts the passed FHIR Resource and associated search parameters to a postgresql FHIR database.

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.util

Methods in com.ibm.fhir.persistence.jdbc.util that throw FHIRPersistenceException
Modifier and Type	Method	Description
`protected SqlQueryData`	JDBCQueryBuilder.`buildLocationQuerySegment(String parmName, List<Bounding> boundingAreas, String paramTableAlias)`
`protected SqlQueryData`	JDBCQueryBuilder.`processCompositeParm(Class<?> resourceType, QueryParameter queryParm)`
`protected SqlQueryData`	JDBCQueryBuilder.`processNumberParm(Class<?> resourceType, QueryParameter queryParm)`
`protected SqlQueryData`	JDBCQueryBuilder.`processStringParm(QueryParameter queryParm)`
`protected SqlQueryData`	JDBCQueryBuilder.`processTokenParm(QueryParameter queryParm)`
`protected SqlQueryData`	JDBCQueryBuilder.`processUriParm(QueryParameter queryParm)`
`protected SqlQueryData`	JDBCQueryBuilder.`processUriParm(QueryParameter queryParm, String tableAlias)`	Creates a query segment for a URI type parameter.

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.jdbc.util.type

Methods in com.ibm.fhir.persistence.jdbc.util.type that throw FHIRPersistenceException
Modifier and Type	Method	Description
`void`	QuantityParmBehaviorUtil.`addSystemIfPresent(ParameterDAO parameterDao, StringBuilder whereClauseSegment, String tableAlias, List<Object> bindVariables, String system)`	adds the system if present.
`static void`	NumberParmBehaviorUtil.`executeBehavior(StringBuilder whereClauseSegment, QueryParameter queryParm, List<Object> bindVariables, Class<?> resourceType, String tableAlias, JDBCQueryBuilder queryBuilder)`

Uses of FHIRPersistenceException in com.ibm.fhir.persistence.util

Methods in com.ibm.fhir.persistence.util that throw FHIRPersistenceException
Modifier and Type	Method	Description
`protected abstract T1`	AbstractQueryBuilder.`buildLocationQuerySegment(String parmName, List<Bounding> boundingAreas, String paramTableAlias)`	Builds a query segment for the passed parameter name using the geospatial data contained with the passed BoundingBox
`T`	QueryBuilder.`buildQuery(Class<?> resourceType, FHIRSearchContext searchContext)`	Build and return query for the passed resource type and search parameters.
`static FHIRHistoryContext`	FHIRPersistenceUtil.`parseHistoryParameters(Map<String,List<String>> queryParameters, boolean lenient)`
`protected abstract T1`	AbstractQueryBuilder.`processCompositeParm(Class<?> resourceType, QueryParameter queryParm)`	Creates a query segment for a Composite type parameter.
`protected T1`	AbstractQueryBuilder.`processLocationPosition(List<QueryParameter> queryParameters, String paramTableAlias)`	This method executes special logic for a Token type query that maps to a LocationPosition data type.
`protected abstract T1`	AbstractQueryBuilder.`processNumberParm(Class<?> resourceType, QueryParameter queryParm)`	Creates a query segment for a Number type parameter.
`protected abstract T1`	AbstractQueryBuilder.`processStringParm(QueryParameter queryParm)`	Creates a query segment for a String type parameter.
`protected abstract T1`	AbstractQueryBuilder.`processTokenParm(QueryParameter queryParm)`	Creates a query segment for a Token type parameter.
`protected abstract T1`	AbstractQueryBuilder.`processUriParm(QueryParameter queryParm)`	Creates a query segment for a URI type parameter.

Uses of FHIRPersistenceException in com.ibm.fhir.server.resources

Methods in com.ibm.fhir.server.resources that throw FHIRPersistenceException
Modifier and Type	Method	Description
`protected FHIRPersistence`	FHIRResource.`getPersistenceImpl()`	Retrieves the persistence implementation to use for the current request.
`protected boolean`	FHIRResource.`isDeleteSupported()`